List subworkflows
The nf-core subworkflows list
command provides the subcommands remote
and local
for listing subworkflows installed in a remote repository and in the local pipeline respectively. Both subcommands allow to use a pattern for filtering the subworkflows by keywords eg: nf-core subworkflows list <subworkflow_name> <keyword>
.
List remote subworkflows
To list all subworkflows available on nf-core/modules, you can use
nf-core subworkflows list remote
, which will print all available subworkflows to the terminal.
List installed subworkflows
To list subworkflows installed in a local pipeline directory you can use nf-core subworkflows list local
. This will list the subworkflows install in the current working directory by default. If you want to specify another directory, use the --dir <pipeline_dir>
flag.