Description

Merges the annotation gtf file and the stringtie output gtf files

Input

name:type
description
pattern

stringtie_gtf{:bash}

:file

Stringtie transcript gtf output(s).

*.gtf

annotation_gtf{:bash}

:file

Annotation gtf file (optional).

*.gtf

Output

name:type
description
pattern

gtf{:bash}

stringtie.merged.gtf{:bash}

:file

Merged gtf file

stringtie.merged.gtf

versions{:bash}

versions.yml{:bash}

:file

File containing software versions

versions.yml

Tools

stringtie2
MIT

Transcript assembly and quantification for RNA-Seq