Performs quality control of FASTQ files
meta{:bash}
:map
Groovy Map containing sample information e.g. [ id:'sample1', single_end:false ]
[ id:'sample1', single_end:false ]
reads{:bash}
:file
List of input FastQ files of size 1 and 2 for single-end and paired-end data, respectively.
*.{fastq,fastq.gz}
info{:bash}
Groovy Map containing sample information
*.txt{:bash}
Contains info if process ran successfully
versions{:bash}
versions.yml{:bash}
File containing software versions
versions.yml
Validation and manipulation of FASTQ files, scRNA-seq barcode pre-processing and UMI quantification.
